
Few things beat the aroma of homemade pretzels in the oven especially when they come bubbling with gooey melty cheese inside. Cheese—stuffed pretzels have become my cozy weekend baking project transforming a basic dough into something extra comforting and just a bit decadent. They are soft chewy and oh—so—warm from the oven perfect for sharing with a crowd or simply treating yourself on a crisp afternoon.
My first time making these I remember the kitchen filling up with the scent of warm yeast and cheese and I ended up with a tray that disappeared before they even cooled completely. Ever since they have been my game day favorite when friends come over.
Ingredients
- Warm water: needed for activating the yeast and hydrating the dough use filtered if possible for best results
- Active dry yeast: makes the dough rise check the expiration date for full lift
- Granulated sugar: helps feed the yeast and adds just a hint of sweetness
- All—purpose flour: forms the structure of the pretzels opt for unbleached for better texture
- Kosher salt: deepens the flavor in the dough and balances the cheese
- Baking soda: necessary for creating the classic chewy pretzel crust
- Egg: for an egg wash that gives beautiful shine and helps salt stick use a fresh large egg
- Shredded cheese: cheddar or mozzarella melt beautifully choose a high—quality block and shred it yourself for best melting
- Coarse sea salt: for a satisfying crunchy finish pick a flaky variety if you can
Instructions
- Prepare the Yeast Mixture:
- Sprinkle the yeast and sugar over the warm water in a large bowl. Let it sit undisturbed for about five minutes. Look for bubbles or foam which means your yeast is alive and the dough will rise properly.
- Combine Flour and Salt:
- In a separate bowl whisk together the flour and kosher salt to distribute the salt evenly and avoid any salty pockets in your dough.
- Make the Dough:
- Gradually add the dry mixture to the wet in batches stirring with a wooden spoon or dough hook until everything comes together into a rough but shaggy dough. This helps prevent over—mixing and tough pretzels.
- Knead the Dough:
- Turn out the dough onto a lightly floured surface and knead by hand for five to seven minutes. Push the dough with the heel of your hand then fold it over and repeat. You want the dough to become smooth and elastic. Add a little more flour if it is sticky but avoid using too much.
- Ferment the Dough:
- Set the dough in a lightly oiled bowl turning it once to coat. Cover with a clean dish towel and let it rise for about thirty minutes in a warm spot. It should double in size and get pillowy.
- Preheat and Prepare:
- While the dough is rising preheat your oven to four hundred twenty five degrees F two hundred twenty Celsius and line a large sheet with parchment. Bring a big pot of water to a gentle boil ahead of time.
- Make the Baking Soda Bath:
- Carefully add baking soda to your boiling water—I do this slowly as it will bubble up dramatically. This step is what gives pretzels their deep flavor and golden brown color.
- Shape the Pretzels:
- Once the dough has risen punch it down to release air bubbles. Divide into equal pieces rolling each into a long rope at least sixteen inches. Twist into a classic pretzel shape crossing the ends over and pressing them down firmly.
- Simmer in Baking Soda:
- One by one gently lower each shaped pretzel into the simmering baking soda water. Count to thirty then remove carefully with a slotted spoon letting excess water drip off before placing on your prepared tray.
- Fill with Cheese:
- While the boiled pretzels are still warm use a knife to make a neat slit along the thickest part and fill inside with shredded cheese. Tuck the flap back over to keep the filling enclosed.
- Egg Wash and Salt:
- Use a pastry brush to coat each pretzel with beaten egg. Sprinkle with a generous pinch of coarse sea salt for that classic crunchy topping.
- Bake to Golden Perfection:
- Bake for fifteen to twenty minutes on the top rack. Look for a rich golden brown color with cheese bubbling out of the centers. Rotate the tray once during baking for even color.
- Cool and Serve:
- Let the pretzels cool for just a few minutes so you can eat them while they are warm and the cheese is still stretchy and gooey.

Cheddar is always a hit in our house since it brings a sharp tang that balances the hints of sweetness in the dough. I still remember setting out these pretzels for a movie night and hearing everyone crunch into the first bite at the same time pure joy in the simplest form.
Storage Tips
Pretzels are freshest the day they are baked but you can store leftovers in an airtight container at room temperature for up to two days. To reheat pop them in a low oven five minutes and they spring back to life warm and soft. If you want to freeze them wrap well in foil and place in zippered freezer bags. Thaw and reheat directly from frozen as needed.
Ingredient Substitutions
You do not have to stick to cheddar or mozzarella for the cheese filling. Try smoked Gouda for a rich twist or pepper jack for a spicy kick. If you are avoiding egg brush with melted butter instead for a shiny golden finish and extra flavor.
Serving Suggestions
These pretzels are ideal for dipping in spicy brown mustard queso dip or even a hearty marinara. Slice into smaller sections to serve as a party snack or tuck whole ones into a lunchbox with fruit for a satisfying meal.
Cultural and Historical Context
Pretzels have deep roots in German baking traditions symbolizing luck and prosperity. My take brings a playful modern touch by tucking cheese inside—a favorite treat on Oktoberfest tables and beyond. Kids especially love shaping the dough into pretzel twists and I do not mind the floury mess one bit.
Seasonal Adaptations
Make with sharp Irish cheddar and whole grain mustard in the fall Add roasted jalapenos and pepper jack in the spring for a kick Top with chopped fresh herbs like chives or thyme just before baking in summer
Success Stories
The first time I brought these to a birthday everyone dove in as soon as the tray hit the table. A neighbor asked for the recipe by the next day. It is a snack that brings people together and tastes even better with good company.
Freezer Meal Conversion
To make ahead freeze shaped and boiled unbaked pretzels on a tray until solid then store in a tightly sealed bag. When ready to bake stuff with cheese do the egg wash and salt then bake straight from frozen. Add a couple extra minutes to the timer and they will be perfect.

Cheese—stuffed pretzels taste best fresh from the oven but they also reheat beautifully. Serve them warm and watch them disappear.
Common Recipe Questions
- → What kind of cheese works best for stuffing?
Cheddar or mozzarella are classic, but most meltable cheeses work well. Try your favorite blend for different flavors.
- → How do I get a soft, pillowy pretzel texture?
Knead the dough thoroughly to develop gluten and allow a full rise before shaping to ensure softness.
- → Is the baking soda bath necessary?
Yes, dipping pretzels in a baking soda bath gives them a deep golden color and classic chewy texture.
- → How can I prevent the cheese from leaking out?
Seal the dough around the cheese well and avoid overfilling to keep the cheese inside during baking.
- → Can I freeze cheese-stuffed pretzels?
Yes, bake and cool them completely, then freeze in an airtight bag. Reheat in the oven for best texture.